Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Upk2P38575 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12□□□□□ -0.49
Upk2P38575 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12□□□□□ -0.49
Upk2P38575 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Upk2P38575 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12□□□□□ -0.49
Upk2P38575 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12□□□□□ -0.49
Upk2P38575 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk2P38575 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Upk2P38575 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.99□□□□□ -0.49
Upk2P38575 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Upk2P38575 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Upk2P38575 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.99□□□□□ -0.49
Upk2P38575 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.99□□□□□ -0.49
Upk2P38575 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Gm15770-201ENSMUST00000117498 584 ntBASIC11.99□□□□□ -0.49
Upk2P38575 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.99□□□□□ -0.49
Upk2P38575 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Upk2P38575 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Upk2P38575 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Upk2P38575 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Upk2P38575 Gm9522-201ENSMUST00000182394 926 ntBASIC11.99□□□□□ -0.49
Upk2P38575 Gm27838-201ENSMUST00000184829 128 ntBASIC11.99□□□□□ -0.49
Upk2P38575 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.99□□□□□ -0.49
Upk2P38575 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.99□□□□□ -0.49
Upk2P38575 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Upk2P38575 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.99□□□□□ -0.49
Upk2P38575 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.99□□□□□ -0.49
Upk2P38575 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.99□□□□□ -0.49
Upk2P38575 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.99□□□□□ -0.49
Upk2P38575 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk2P38575 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Upk2P38575 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Upk2P38575 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Upk2P38575 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Upk2P38575 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Upk2P38575 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.98□□□□□ -0.49
Upk2P38575 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.98□□□□□ -0.49
Upk2P38575 Gm15487-201ENSMUST00000122373 465 ntBASIC11.98□□□□□ -0.49
Upk2P38575 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.98□□□□□ -0.49
Upk2P38575 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Upk2P38575 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Upk2P38575 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.98□□□□□ -0.49
Upk2P38575 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Upk2P38575 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Upk2P38575 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms