Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 BC001981-202ENSMUST00000191393 1545 ntBASIC13.64□□□□□ -0.23
LdlrP35951 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
LdlrP35951 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LdlrP35951 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LdlrP35951 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LdlrP35951 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LdlrP35951 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.63□□□□□ -0.23
LdlrP35951 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.63□□□□□ -0.23
LdlrP35951 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.63□□□□□ -0.23
LdlrP35951 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.63□□□□□ -0.23
LdlrP35951 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.63□□□□□ -0.23
LdlrP35951 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.63□□□□□ -0.23
LdlrP35951 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LdlrP35951 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LdlrP35951 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LdlrP35951 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.62□□□□□ -0.23
LdlrP35951 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
LdlrP35951 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.62□□□□□ -0.23
LdlrP35951 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.62□□□□□ -0.23
LdlrP35951 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.62□□□□□ -0.23
LdlrP35951 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Gm38225-201ENSMUST00000194001 393 ntBASIC13.62□□□□□ -0.23
LdlrP35951 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.62□□□□□ -0.23
LdlrP35951 Gm6888-201ENSMUST00000221983 706 ntBASIC13.62□□□□□ -0.23
LdlrP35951 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LdlrP35951 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.62□□□□□ -0.23
LdlrP35951 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LdlrP35951 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LdlrP35951 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LdlrP35951 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.61□□□□□ -0.23
LdlrP35951 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LdlrP35951 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LdlrP35951 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
LdlrP35951 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
LdlrP35951 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LdlrP35951 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LdlrP35951 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Gm7488-201ENSMUST00000117148 684 ntBASIC13.61□□□□□ -0.23
LdlrP35951 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.61□□□□□ -0.23
LdlrP35951 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.61□□□□□ -0.23
LdlrP35951 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.61□□□□□ -0.23
LdlrP35951 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms