Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfc1P35601 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.41□□□□□ -0.1
Rfc1P35601 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfc1P35601 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc1P35601 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfc1P35601 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc1P35601 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc1P35601 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc1P35601 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rfc1P35601 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc1P35601 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc1P35601 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc1P35601 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc1P35601 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfc1P35601 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc1P35601 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.4□□□□□ -0.1
Rfc1P35601 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rfc1P35601 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfc1P35601 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc1P35601 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Rfc1P35601 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc1P35601 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rfc1P35601 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc1P35601 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Rfc1P35601 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rfc1P35601 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rfc1P35601 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Rfc1P35601 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rfc1P35601 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.39□□□□□ -0.11
Rfc1P35601 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.39□□□□□ -0.11
Rfc1P35601 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.39□□□□□ -0.11
Rfc1P35601 Gm5364-201ENSMUST00000216789 889 ntBASIC14.39□□□□□ -0.11
Rfc1P35601 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.39□□□□□ -0.11
Rfc1P35601 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.39□□□□□ -0.11
Rfc1P35601 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rfc1P35601 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Rfc1P35601 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rfc1P35601 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rfc1P35601 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc1P35601 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfc1P35601 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Rfc1P35601 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.38□□□□□ -0.11
Rfc1P35601 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rfc1P35601 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rfc1P35601 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.38□□□□□ -0.11
Rfc1P35601 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rfc1P35601 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rfc1P35601 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rfc1P35601 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Gm17968-201ENSMUST00000194902 784 ntBASIC14.38□□□□□ -0.11
Rfc1P35601 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.38□□□□□ -0.11
Rfc1P35601 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.38□□□□□ -0.11
Rfc1P35601 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.38□□□□□ -0.11
Rfc1P35601 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rfc1P35601 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.38□□□□□ -0.11
Rfc1P35601 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc1P35601 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms