Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.58□□□□□ -0.4
Sftpa1P35242 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.58□□□□□ -0.4
Sftpa1P35242 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sftpa1P35242 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 Mir433-201ENSMUST00000093564 124 ntBASIC12.58□□□□□ -0.4
Sftpa1P35242 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.58□□□□□ -0.4
Sftpa1P35242 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.58□□□□□ -0.4
Sftpa1P35242 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.58□□□□□ -0.4
Sftpa1P35242 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sftpa1P35242 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sftpa1P35242 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.58□□□□□ -0.4
Sftpa1P35242 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.58□□□□□ -0.4
Sftpa1P35242 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sftpa1P35242 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.57□□□□□ -0.4
Sftpa1P35242 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.57□□□□□ -0.4
Sftpa1P35242 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.57□□□□□ -0.4
Sftpa1P35242 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.57□□□□□ -0.4
Sftpa1P35242 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Gm22323-201ENSMUST00000103832 109 ntBASIC12.57□□□□□ -0.4
Sftpa1P35242 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.57□□□□□ -0.4
Sftpa1P35242 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Gm17376-201ENSMUST00000166016 84 ntBASIC12.57□□□□□ -0.4
Sftpa1P35242 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Gm6222-202ENSMUST00000182143 629 ntBASIC12.57□□□□□ -0.4
Sftpa1P35242 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.57□□□□□ -0.4
Sftpa1P35242 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.57□□□□□ -0.4
Sftpa1P35242 Mir7070-201ENSMUST00000183657 86 ntBASIC12.57□□□□□ -0.4
Sftpa1P35242 Gm37922-201ENSMUST00000195596 455 ntBASIC12.57□□□□□ -0.4
Sftpa1P35242 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.57□□□□□ -0.4
Sftpa1P35242 Gm18753-201ENSMUST00000201000 566 ntBASIC12.57□□□□□ -0.4
Sftpa1P35242 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.57□□□□□ -0.4
Sftpa1P35242 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.57□□□□□ -0.4
Sftpa1P35242 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.57□□□□□ -0.4
Sftpa1P35242 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sftpa1P35242 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sftpa1P35242 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sftpa1P35242 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sftpa1P35242 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.56□□□□□ -0.4
Sftpa1P35242 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.56□□□□□ -0.4
Sftpa1P35242 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.56□□□□□ -0.4
Sftpa1P35242 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Gm15370-201ENSMUST00000117158 253 ntBASIC12.56□□□□□ -0.4
Sftpa1P35242 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.56□□□□□ -0.4
Sftpa1P35242 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.56□□□□□ -0.4
Sftpa1P35242 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Sftpa1P35242 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.56□□□□□ -0.4
Sftpa1P35242 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Sftpa1P35242 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.56□□□□□ -0.4
Sftpa1P35242 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.56□□□□□ -0.4
Sftpa1P35242 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sftpa1P35242 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms