Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Clk1P22518 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Gm14767-201ENSMUST00000121559 586 ntBASIC12.8□□□□□ -0.36
Clk1P22518 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.8□□□□□ -0.36
Clk1P22518 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Clk1P22518 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.8□□□□□ -0.36
Clk1P22518 Gm8584-201ENSMUST00000171982 758 ntBASIC12.8□□□□□ -0.36
Clk1P22518 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.8□□□□□ -0.36
Clk1P22518 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.8□□□□□ -0.36
Clk1P22518 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Clk1P22518 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.8□□□□□ -0.36
Clk1P22518 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.8□□□□□ -0.36
Clk1P22518 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.8□□□□□ -0.36
Clk1P22518 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Clk1P22518 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.8□□□□□ -0.36
Clk1P22518 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk1P22518 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Clk1P22518 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.79□□□□□ -0.36
Clk1P22518 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Clk1P22518 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.79□□□□□ -0.36
Clk1P22518 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.79□□□□□ -0.36
Clk1P22518 Gm12428-201ENSMUST00000119844 727 ntBASIC12.79□□□□□ -0.36
Clk1P22518 Gm13616-201ENSMUST00000120600 222 ntBASIC12.79□□□□□ -0.36
Clk1P22518 Gm27680-201ENSMUST00000184192 160 ntBASIC12.79□□□□□ -0.36
Clk1P22518 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.79□□□□□ -0.36
Clk1P22518 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clk1P22518 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clk1P22518 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.79□□□□□ -0.36
Clk1P22518 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.79□□□□□ -0.36
Clk1P22518 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.79□□□□□ -0.36
Clk1P22518 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Clk1P22518 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk1P22518 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.78□□□□□ -0.36
Clk1P22518 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Clk1P22518 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clk1P22518 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.78□□□□□ -0.36
Clk1P22518 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Clk1P22518 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Clk1P22518 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk1P22518 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.78□□□□□ -0.36
Clk1P22518 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms