Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Cntn1P12960 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.12□□□□□ -0.31
Cntn1P12960 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cntn1P12960 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.11□□□□□ -0.31
Cntn1P12960 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cntn1P12960 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.11□□□□□ -0.31
Cntn1P12960 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.11□□□□□ -0.31
Cntn1P12960 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cntn1P12960 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.11□□□□□ -0.31
Cntn1P12960 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.11□□□□□ -0.31
Cntn1P12960 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.11□□□□□ -0.31
Cntn1P12960 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.11□□□□□ -0.31
Cntn1P12960 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.11□□□□□ -0.31
Cntn1P12960 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.11□□□□□ -0.31
Cntn1P12960 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.11□□□□□ -0.31
Cntn1P12960 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cntn1P12960 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cntn1P12960 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.1□□□□□ -0.31
Cntn1P12960 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Cntn1P12960 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.1□□□□□ -0.31
Cntn1P12960 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cntn1P12960 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Cntn1P12960 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.1□□□□□ -0.31
Cntn1P12960 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.1□□□□□ -0.31
Cntn1P12960 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.1□□□□□ -0.31
Cntn1P12960 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cntn1P12960 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cntn1P12960 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cntn1P12960 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Cntn1P12960 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.09□□□□□ -0.31
Cntn1P12960 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Cntn1P12960 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Gm15806-201ENSMUST00000120696 955 ntBASIC13.09□□□□□ -0.31
Cntn1P12960 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.09□□□□□ -0.31
Cntn1P12960 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Cntn1P12960 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.09□□□□□ -0.31
Cntn1P12960 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 140 ms