Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fv4P11370 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.23□□□□□ -0.29
Fv4P11370 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fv4P11370 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fv4P11370 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fv4P11370 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Fv4P11370 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
Fv4P11370 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.22□□□□□ -0.29
Fv4P11370 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.22□□□□□ -0.29
Fv4P11370 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Fv4P11370 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.22□□□□□ -0.29
Fv4P11370 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Fv4P11370 Gm12585-201ENSMUST00000117307 290 ntBASIC13.22□□□□□ -0.29
Fv4P11370 Gm6736-201ENSMUST00000166583 948 ntBASIC13.22□□□□□ -0.29
Fv4P11370 Gm25948-201ENSMUST00000175334 112 ntBASIC13.22□□□□□ -0.29
Fv4P11370 Gm24420-201ENSMUST00000176676 59 ntBASIC13.22□□□□□ -0.29
Fv4P11370 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Fv4P11370 Gm3436-201ENSMUST00000179930 840 ntBASIC13.22□□□□□ -0.29
Fv4P11370 Gm27430-201ENSMUST00000184585 107 ntBASIC13.22□□□□□ -0.29
Fv4P11370 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.22□□□□□ -0.29
Fv4P11370 Gm44333-201ENSMUST00000197168 107 ntBASIC13.22□□□□□ -0.29
Fv4P11370 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.22□□□□□ -0.29
Fv4P11370 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Fv4P11370 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.22□□□□□ -0.29
Fv4P11370 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.22□□□□□ -0.29
Fv4P11370 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Fv4P11370 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fv4P11370 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.21□□□□□ -0.29
Fv4P11370 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Fv4P11370 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Fv4P11370 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.21□□□□□ -0.29
Fv4P11370 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.21□□□□□ -0.29
Fv4P11370 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.21□□□□□ -0.29
Fv4P11370 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.21□□□□□ -0.29
Fv4P11370 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fv4P11370 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.21□□□□□ -0.29
Fv4P11370 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fv4P11370 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fv4P11370 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fv4P11370 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fv4P11370 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fv4P11370 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fv4P11370 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Fv4P11370 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fv4P11370 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fv4P11370 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.21□□□□□ -0.3
Fv4P11370 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fv4P11370 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.21□□□□□ -0.3
Fv4P11370 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fv4P11370 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Fv4P11370 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fv4P11370 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fv4P11370 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fv4P11370 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms