Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nid1P10493 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Gm13616-201ENSMUST00000120600 222 ntBASIC12.82□□□□□ -0.36
Nid1P10493 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nid1P10493 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.82□□□□□ -0.36
Nid1P10493 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nid1P10493 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nid1P10493 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Nid1P10493 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nid1P10493 Gm17837-201ENSMUST00000186435 985 ntBASIC12.82□□□□□ -0.36
Nid1P10493 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nid1P10493 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.82□□□□□ -0.36
Nid1P10493 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.82□□□□□ -0.36
Nid1P10493 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Nid1P10493 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nid1P10493 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.81□□□□□ -0.36
Nid1P10493 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.81□□□□□ -0.36
Nid1P10493 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nid1P10493 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Nid1P10493 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.81□□□□□ -0.36
Nid1P10493 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.81□□□□□ -0.36
Nid1P10493 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.81□□□□□ -0.36
Nid1P10493 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nid1P10493 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Nid1P10493 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.81□□□□□ -0.36
Nid1P10493 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nid1P10493 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.8□□□□□ -0.36
Nid1P10493 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
Nid1P10493 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.8□□□□□ -0.36
Nid1P10493 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nid1P10493 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nid1P10493 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Nid1P10493 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.8□□□□□ -0.36
Nid1P10493 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.8□□□□□ -0.36
Nid1P10493 Gm4875-201ENSMUST00000118257 786 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms