Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Syt7-205ENSMUST00000224135 1557 ntBASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Gm27437-201ENSMUST00000183429 107 ntBASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Gm7730-201ENSMUST00000212486 454 ntBASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp6P0C0A3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Gm4804-201ENSMUST00000182234 999 ntBASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Gm2423-201ENSMUST00000074863 733 ntBASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp6P0C0A3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp6P0C0A3 Gm5866-201ENSMUST00000177881 973 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms