Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclP09405 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NclP09405 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NclP09405 Gm8835-201ENSMUST00000173096 1169 ntBASIC20.24■□□□□ 0.83
NclP09405 Gm7561-201ENSMUST00000211203 886 ntBASIC20.24■□□□□ 0.83
NclP09405 Gm17330-201ENSMUST00000221047 165 ntBASIC20.24■□□□□ 0.83
NclP09405 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NclP09405 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclP09405 Gm21451-201ENSMUST00000111062 2775 ntBASIC20.24■□□□□ 0.83
NclP09405 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclP09405 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC20.24■□□□□ 0.83
NclP09405 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclP09405 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclP09405 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclP09405 Gm13730-201ENSMUST00000121036 1462 ntBASIC20.24■□□□□ 0.83
NclP09405 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NclP09405 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NclP09405 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
NclP09405 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC20.23■□□□□ 0.83
NclP09405 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC20.23■□□□□ 0.83
NclP09405 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NclP09405 Gm38230-201ENSMUST00000193572 1159 ntBASIC20.23■□□□□ 0.83
NclP09405 AY702102-202ENSMUST00000194651 1173 ntBASIC20.23■□□□□ 0.83
NclP09405 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NclP09405 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC20.23■□□□□ 0.83
NclP09405 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NclP09405 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
NclP09405 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NclP09405 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
NclP09405 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NclP09405 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NclP09405 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NclP09405 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NclP09405 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NclP09405 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NclP09405 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC20.22■□□□□ 0.83
NclP09405 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NclP09405 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NclP09405 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC20.22■□□□□ 0.83
NclP09405 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC20.22■□□□□ 0.83
NclP09405 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NclP09405 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC20.22■□□□□ 0.83
NclP09405 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC20.22■□□□□ 0.83
NclP09405 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC20.22■□□□□ 0.83
NclP09405 Gm18473-201ENSMUST00000220543 868 ntBASIC20.22■□□□□ 0.83
NclP09405 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Gm10012-201ENSMUST00000078252 192 ntBASIC20.22■□□□□ 0.83
NclP09405 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NclP09405 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NclP09405 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC20.22■□□□□ 0.83
NclP09405 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NclP09405 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC20.22■□□□□ 0.83
NclP09405 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NclP09405 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NclP09405 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC20.21■□□□□ 0.83
NclP09405 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC20.21■□□□□ 0.83
NclP09405 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
NclP09405 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC20.21■□□□□ 0.83
NclP09405 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 AC125350.2-201ENSMUST00000224737 727 ntBASIC20.21■□□□□ 0.83
NclP09405 Gm6091-201ENSMUST00000098307 165 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms