Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ApoeP08226 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.93□□□□□ -0.34
ApoeP08226 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
ApoeP08226 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Gm6222-201ENSMUST00000120787 396 ntBASIC12.93□□□□□ -0.34
ApoeP08226 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.93□□□□□ -0.34
ApoeP08226 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.93□□□□□ -0.34
ApoeP08226 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Gm37714-201ENSMUST00000194742 342 ntBASIC12.93□□□□□ -0.34
ApoeP08226 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.93□□□□□ -0.34
ApoeP08226 Gm20553-201ENSMUST00000204205 844 ntBASIC12.93□□□□□ -0.34
ApoeP08226 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ApoeP08226 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.93□□□□□ -0.34
ApoeP08226 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.93□□□□□ -0.34
ApoeP08226 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ApoeP08226 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ApoeP08226 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
ApoeP08226 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ApoeP08226 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.92□□□□□ -0.34
ApoeP08226 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ApoeP08226 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.92□□□□□ -0.34
ApoeP08226 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ApoeP08226 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.92□□□□□ -0.34
ApoeP08226 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.92□□□□□ -0.34
ApoeP08226 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.92□□□□□ -0.34
ApoeP08226 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.92□□□□□ -0.34
ApoeP08226 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.92□□□□□ -0.34
ApoeP08226 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.92□□□□□ -0.34
ApoeP08226 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.92□□□□□ -0.34
ApoeP08226 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.92□□□□□ -0.34
ApoeP08226 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ApoeP08226 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.92□□□□□ -0.34
ApoeP08226 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ApoeP08226 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
ApoeP08226 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ApoeP08226 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.92□□□□□ -0.34
ApoeP08226 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ApoeP08226 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
ApoeP08226 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.91□□□□□ -0.34
ApoeP08226 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ApoeP08226 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
ApoeP08226 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
ApoeP08226 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
ApoeP08226 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.91□□□□□ -0.34
ApoeP08226 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.91□□□□□ -0.34
ApoeP08226 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ApoeP08226 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.91□□□□□ -0.34
ApoeP08226 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms