Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
P06344 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.18□□□□□ -0.46
P06344 Gm12138-201ENSMUST00000122180 951 ntBASIC12.18□□□□□ -0.46
P06344 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.18□□□□□ -0.46
P06344 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.18□□□□□ -0.46
P06344 Gm19078-201ENSMUST00000206311 727 ntBASIC12.18□□□□□ -0.46
P06344 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.18□□□□□ -0.46
P06344 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.18□□□□□ -0.46
P06344 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
P06344 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P06344 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.18□□□□□ -0.46
P06344 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P06344 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.17□□□□□ -0.46
P06344 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
P06344 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
P06344 Gm11524-201ENSMUST00000119349 807 ntBASIC12.17□□□□□ -0.46
P06344 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
P06344 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Mir7654-201ENSMUST00000185082 70 ntBASIC12.17□□□□□ -0.46
P06344 Gm43094-201ENSMUST00000196549 921 ntBASIC12.17□□□□□ -0.46
P06344 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.17□□□□□ -0.46
P06344 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
P06344 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.17□□□□□ -0.46
P06344 Gm45384-201ENSMUST00000210451 277 ntBASIC12.17□□□□□ -0.46
P06344 Gm5186-201ENSMUST00000218781 920 ntBASIC12.17□□□□□ -0.46
P06344 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.17□□□□□ -0.46
P06344 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.17□□□□□ -0.46
P06344 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
P06344 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
P06344 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
P06344 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06344 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
P06344 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.16□□□□□ -0.46
P06344 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
P06344 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
P06344 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.16□□□□□ -0.46
P06344 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
P06344 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
P06344 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.16□□□□□ -0.46
P06344 Gm15376-201ENSMUST00000122258 783 ntBASIC12.16□□□□□ -0.46
P06344 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P06344 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms