Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CfdP03953 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.42□□□□□ -0.58
CfdP03953 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CfdP03953 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.41□□□□□ -0.58
CfdP03953 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CfdP03953 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CfdP03953 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.41□□□□□ -0.58
CfdP03953 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.41□□□□□ -0.58
CfdP03953 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.41□□□□□ -0.58
CfdP03953 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
CfdP03953 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
CfdP03953 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.41□□□□□ -0.58
CfdP03953 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
CfdP03953 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CfdP03953 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CfdP03953 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CfdP03953 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.41□□□□□ -0.58
CfdP03953 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
CfdP03953 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.4□□□□□ -0.58
CfdP03953 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.4□□□□□ -0.58
CfdP03953 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
CfdP03953 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.4□□□□□ -0.58
CfdP03953 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CfdP03953 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.4□□□□□ -0.58
CfdP03953 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
CfdP03953 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
CfdP03953 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Rpph1-201ENSMUST00000175096 319 ntBASIC11.4□□□□□ -0.58
CfdP03953 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.4□□□□□ -0.58
CfdP03953 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CfdP03953 Gm29310-201ENSMUST00000185468 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21825-201ENSMUST00000185728 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CfdP03953 Gm29109-201ENSMUST00000185895 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21896-201ENSMUST00000186520 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21873-201ENSMUST00000186728 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21794-201ENSMUST00000187056 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21880-201ENSMUST00000187275 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21826-201ENSMUST00000187451 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21198-201ENSMUST00000188393 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21749-201ENSMUST00000189343 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21901-201ENSMUST00000189568 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm29424-201ENSMUST00000189716 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm28599-201ENSMUST00000189838 694 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21867-201ENSMUST00000189917 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm29269-201ENSMUST00000190087 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21722-201ENSMUST00000190153 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm28423-201ENSMUST00000190701 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21899-201ENSMUST00000190745 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21910-201ENSMUST00000191163 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21849-201ENSMUST00000191571 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm28678-201ENSMUST00000191593 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm20910-201ENSMUST00000193268 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm21871-201ENSMUST00000194621 696 ntBASIC11.4□□□□□ -0.58
CfdP03953 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CfdP03953 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.4□□□□□ -0.58
CfdP03953 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.4□□□□□ -0.58
CfdP03953 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms