Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa3P02831 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa3P02831 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxa3P02831 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa3P02831 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.48□□□□□ -0.57
Hoxa3P02831 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa3P02831 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa3P02831 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa3P02831 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa3P02831 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa3P02831 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa3P02831 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.48□□□□□ -0.57
Hoxa3P02831 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa3P02831 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa3P02831 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxa3P02831 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.47□□□□□ -0.57
Hoxa3P02831 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxa3P02831 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Hoxa3P02831 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Hoxa3P02831 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxa3P02831 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.47□□□□□ -0.57
Hoxa3P02831 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Hoxa3P02831 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.47□□□□□ -0.57
Hoxa3P02831 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hoxa3P02831 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxa3P02831 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxa3P02831 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxa3P02831 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.46□□□□□ -0.57
Hoxa3P02831 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.46□□□□□ -0.57
Hoxa3P02831 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.46□□□□□ -0.57
Hoxa3P02831 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Hoxa3P02831 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.46□□□□□ -0.57
Hoxa3P02831 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.46□□□□□ -0.57
Hoxa3P02831 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.46□□□□□ -0.57
Hoxa3P02831 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.46□□□□□ -0.57
Hoxa3P02831 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.46□□□□□ -0.57
Hoxa3P02831 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Hoxa3P02831 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxa3P02831 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxa3P02831 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxa3P02831 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa3P02831 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa3P02831 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa3P02831 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa3P02831 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.46□□□□□ -0.58
Hoxa3P02831 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa3P02831 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.46□□□□□ -0.58
Hoxa3P02831 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxa3P02831 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.46□□□□□ -0.58
Hoxa3P02831 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa3P02831 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa3P02831 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxa3P02831 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms