Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.41□□□□□ -0.26
ClppO88696 Gm5354-201ENSMUST00000182417 973 ntBASIC13.41□□□□□ -0.26
ClppO88696 Gm10766-202ENSMUST00000194123 606 ntBASIC13.41□□□□□ -0.26
ClppO88696 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ClppO88696 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.41□□□□□ -0.26
ClppO88696 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ClppO88696 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ClppO88696 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.41□□□□□ -0.26
ClppO88696 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.4□□□□□ -0.26
ClppO88696 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.4□□□□□ -0.26
ClppO88696 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ClppO88696 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.4□□□□□ -0.26
ClppO88696 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.4□□□□□ -0.26
ClppO88696 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.4□□□□□ -0.26
ClppO88696 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.4□□□□□ -0.26
ClppO88696 Gm18187-201ENSMUST00000196476 984 ntBASIC13.4□□□□□ -0.26
ClppO88696 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Gm18624-201ENSMUST00000220966 658 ntBASIC13.4□□□□□ -0.26
ClppO88696 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ClppO88696 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ClppO88696 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.4□□□□□ -0.26
ClppO88696 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
ClppO88696 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
ClppO88696 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ClppO88696 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ClppO88696 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClppO88696 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
ClppO88696 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ClppO88696 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ClppO88696 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.39□□□□□ -0.27
ClppO88696 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.39□□□□□ -0.27
ClppO88696 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.39□□□□□ -0.27
ClppO88696 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Gm21470-201ENSMUST00000187680 696 ntBASIC13.39□□□□□ -0.27
ClppO88696 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.39□□□□□ -0.27
ClppO88696 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ClppO88696 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
ClppO88696 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.39□□□□□ -0.27
ClppO88696 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ClppO88696 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
ClppO88696 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClppO88696 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
ClppO88696 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClppO88696 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ClppO88696 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
ClppO88696 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 231.6 ms