Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Gm45668-201ENSMUST00000211271 493 ntBASIC13.51□□□□□ -0.25
Pdlim1O70400 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pdlim1O70400 Gm18624-201ENSMUST00000220966 658 ntBASIC13.51□□□□□ -0.25
Pdlim1O70400 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.51□□□□□ -0.25
Pdlim1O70400 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pdlim1O70400 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pdlim1O70400 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.51□□□□□ -0.25
Pdlim1O70400 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim1O70400 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Gm12341-201ENSMUST00000119724 503 ntBASIC13.5□□□□□ -0.25
Pdlim1O70400 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.5□□□□□ -0.25
Pdlim1O70400 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.5□□□□□ -0.25
Pdlim1O70400 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim1O70400 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Pdlim1O70400 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim1O70400 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim1O70400 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.49□□□□□ -0.25
Pdlim1O70400 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim1O70400 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim1O70400 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.49□□□□□ -0.25
Pdlim1O70400 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Mir6392-201ENSMUST00000184924 108 ntBASIC13.49□□□□□ -0.25
Pdlim1O70400 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.49□□□□□ -0.25
Pdlim1O70400 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim1O70400 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim1O70400 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim1O70400 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.49□□□□□ -0.25
Pdlim1O70400 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.49□□□□□ -0.25
Pdlim1O70400 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim1O70400 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms