Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.16□□□□□ -0.14
Cldn5O54942 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn5O54942 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn5O54942 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.16□□□□□ -0.14
Cldn5O54942 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn5O54942 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Cldn5O54942 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Cldn5O54942 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.16□□□□□ -0.14
Cldn5O54942 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.16□□□□□ -0.14
Cldn5O54942 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.16□□□□□ -0.14
Cldn5O54942 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.16□□□□□ -0.14
Cldn5O54942 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.16□□□□□ -0.14
Cldn5O54942 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.16□□□□□ -0.14
Cldn5O54942 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn5O54942 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn5O54942 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn5O54942 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn5O54942 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cldn5O54942 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.15□□□□□ -0.14
Cldn5O54942 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.15□□□□□ -0.14
Cldn5O54942 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.15□□□□□ -0.14
Cldn5O54942 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.15□□□□□ -0.14
Cldn5O54942 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Cldn5O54942 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.15□□□□□ -0.14
Cldn5O54942 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.15□□□□□ -0.14
Cldn5O54942 Mir1894-201ENSMUST00000122802 81 ntBASIC14.15□□□□□ -0.14
Cldn5O54942 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Gm17150-201ENSMUST00000165577 381 ntBASIC14.15□□□□□ -0.14
Cldn5O54942 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cldn5O54942 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Gm38144-201ENSMUST00000192790 465 ntBASIC14.15□□□□□ -0.14
Cldn5O54942 Gm44397-201ENSMUST00000195950 113 ntBASIC14.15□□□□□ -0.14
Cldn5O54942 Gm43433-201ENSMUST00000196573 481 ntBASIC14.15□□□□□ -0.14
Cldn5O54942 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Cldn5O54942 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.15□□□□□ -0.14
Cldn5O54942 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.15□□□□□ -0.14
Cldn5O54942 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.15□□□□□ -0.14
Cldn5O54942 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.15□□□□□ -0.14
Cldn5O54942 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.15□□□□□ -0.14
Cldn5O54942 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.15□□□□□ -0.14
Cldn5O54942 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn5O54942 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.15
Cldn5O54942 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cldn5O54942 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.15
Cldn5O54942 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cldn5O54942 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.14□□□□□ -0.15
Cldn5O54942 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Cldn5O54942 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.14□□□□□ -0.15
Cldn5O54942 Gm27839-201ENSMUST00000184242 106 ntBASIC14.14□□□□□ -0.15
Cldn5O54942 Gm7287-201ENSMUST00000205267 602 ntBASIC14.14□□□□□ -0.15
Cldn5O54942 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldn5O54942 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.14□□□□□ -0.15
Cldn5O54942 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldn5O54942 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cldn5O54942 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn5O54942 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cldn5O54942 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 493 ms