Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarce1O54941 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smarce1O54941 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarce1O54941 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.25■□□□□ 0.19
Smarce1O54941 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Smarce1O54941 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Smarce1O54941 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarce1O54941 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Smarce1O54941 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.25■□□□□ 0.19
Smarce1O54941 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smarce1O54941 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Smarce1O54941 Gm4995-201ENSMUST00000117247 432 ntBASIC16.25■□□□□ 0.19
Smarce1O54941 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.25■□□□□ 0.19
Smarce1O54941 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.25■□□□□ 0.19
Smarce1O54941 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.25■□□□□ 0.19
Smarce1O54941 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smarce1O54941 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.25■□□□□ 0.19
Smarce1O54941 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.25■□□□□ 0.19
Smarce1O54941 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarce1O54941 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarce1O54941 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarce1O54941 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarce1O54941 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Smarce1O54941 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarce1O54941 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarce1O54941 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.25■□□□□ 0.19
Smarce1O54941 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.25■□□□□ 0.19
Smarce1O54941 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarce1O54941 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smarce1O54941 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.24■□□□□ 0.19
Smarce1O54941 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Smarce1O54941 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.24■□□□□ 0.19
Smarce1O54941 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.24■□□□□ 0.19
Smarce1O54941 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.24■□□□□ 0.19
Smarce1O54941 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarce1O54941 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.23■□□□□ 0.19
Smarce1O54941 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Smarce1O54941 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smarce1O54941 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Gm4804-201ENSMUST00000182234 999 ntBASIC16.23■□□□□ 0.19
Smarce1O54941 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.23■□□□□ 0.19
Smarce1O54941 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.23■□□□□ 0.19
Smarce1O54941 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smarce1O54941 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.23■□□□□ 0.19
Smarce1O54941 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarce1O54941 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.22■□□□□ 0.19
Smarce1O54941 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smarce1O54941 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
Smarce1O54941 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms