Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm7287-201ENSMUST00000205267 602 ntBASIC14.07□□□□□ -0.16
Sdc4O35988 Gm18062-201ENSMUST00000208020 547 ntBASIC14.07□□□□□ -0.16
Sdc4O35988 Gm18055-201ENSMUST00000208254 547 ntBASIC14.07□□□□□ -0.16
Sdc4O35988 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Gm25857-201ENSMUST00000082788 129 ntBASIC14.07□□□□□ -0.16
Sdc4O35988 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.07□□□□□ -0.16
Sdc4O35988 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.07□□□□□ -0.16
Sdc4O35988 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.07□□□□□ -0.16
Sdc4O35988 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc4O35988 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sdc4O35988 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.06□□□□□ -0.16
Sdc4O35988 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Sdc4O35988 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sdc4O35988 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sdc4O35988 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.06□□□□□ -0.16
Sdc4O35988 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sdc4O35988 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.06□□□□□ -0.16
Sdc4O35988 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sdc4O35988 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Sdc4O35988 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.06□□□□□ -0.16
Sdc4O35988 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sdc4O35988 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Sdc4O35988 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sdc4O35988 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc4O35988 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.05□□□□□ -0.16
Sdc4O35988 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sdc4O35988 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.05□□□□□ -0.16
Sdc4O35988 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sdc4O35988 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Sdc4O35988 Gm17330-201ENSMUST00000221047 165 ntBASIC14.05□□□□□ -0.16
Sdc4O35988 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sdc4O35988 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.05□□□□□ -0.16
Sdc4O35988 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.05□□□□□ -0.16
Sdc4O35988 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc4O35988 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms