Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.16□□□□□ -0.46
Lsm2O35900 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm2O35900 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm2O35900 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Lsm2O35900 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm2O35900 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Lsm2O35900 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lsm2O35900 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lsm2O35900 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.16□□□□□ -0.46
Lsm2O35900 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm2O35900 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm2O35900 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm2O35900 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm2O35900 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm2O35900 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Lsm2O35900 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lsm2O35900 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lsm2O35900 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lsm2O35900 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lsm2O35900 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Gm6222-201ENSMUST00000120787 396 ntBASIC12.15□□□□□ -0.46
Lsm2O35900 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.15□□□□□ -0.46
Lsm2O35900 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.15□□□□□ -0.46
Lsm2O35900 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.15□□□□□ -0.46
Lsm2O35900 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.15□□□□□ -0.46
Lsm2O35900 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.15□□□□□ -0.46
Lsm2O35900 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lsm2O35900 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lsm2O35900 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm2O35900 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm2O35900 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm2O35900 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm2O35900 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lsm2O35900 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Lsm2O35900 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lsm2O35900 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 Mir698-201ENSMUST00000102164 109 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 Gm15427-201ENSMUST00000117288 531 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 Gm2810-201ENSMUST00000118681 990 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.14□□□□□ -0.47
Lsm2O35900 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lsm2O35900 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Lsm2O35900 Mir8098-201ENSMUST00000184011 137 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm2O35900 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.14□□□□□ -0.47
Lsm2O35900 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm2O35900 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms