Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1i3O35627 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.06
Nr1i3O35627 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Nr1i3O35627 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.71□□□□□ -0.06
Nr1i3O35627 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Nr1i3O35627 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.7□□□□□ -0.06
Nr1i3O35627 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.7□□□□□ -0.06
Nr1i3O35627 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.7□□□□□ -0.06
Nr1i3O35627 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Nr1i3O35627 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.7□□□□□ -0.06
Nr1i3O35627 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Gm15240-201ENSMUST00000118156 720 ntBASIC14.7□□□□□ -0.06
Nr1i3O35627 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.7□□□□□ -0.06
Nr1i3O35627 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.7□□□□□ -0.06
Nr1i3O35627 Gm6736-201ENSMUST00000166583 948 ntBASIC14.7□□□□□ -0.06
Nr1i3O35627 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Gm27618-201ENSMUST00000183671 60 ntBASIC14.7□□□□□ -0.06
Nr1i3O35627 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.7□□□□□ -0.06
Nr1i3O35627 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Nr1i3O35627 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.7□□□□□ -0.06
Nr1i3O35627 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Nr1i3O35627 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Nr1i3O35627 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.7□□□□□ -0.06
Nr1i3O35627 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1i3O35627 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.69□□□□□ -0.06
Nr1i3O35627 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.69□□□□□ -0.06
Nr1i3O35627 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nr1i3O35627 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.69□□□□□ -0.06
Nr1i3O35627 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.69□□□□□ -0.06
Nr1i3O35627 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nr1i3O35627 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Nr1i3O35627 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Gm15678-201ENSMUST00000117573 960 ntBASIC14.69□□□□□ -0.06
Nr1i3O35627 Gm25948-201ENSMUST00000175334 112 ntBASIC14.69□□□□□ -0.06
Nr1i3O35627 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.69□□□□□ -0.06
Nr1i3O35627 Gm5867-201ENSMUST00000063197 592 ntBASIC14.69□□□□□ -0.06
Nr1i3O35627 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Nr1i3O35627 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nr1i3O35627 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nr1i3O35627 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.69□□□□□ -0.06
Nr1i3O35627 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1i3O35627 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms