Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Efnb3O35393 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Efnb3O35393 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Efnb3O35393 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Efnb3O35393 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.8□□□□□ -0.68
Efnb3O35393 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Efnb3O35393 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.8□□□□□ -0.68
Efnb3O35393 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.8□□□□□ -0.68
Efnb3O35393 Gm29741-201ENSMUST00000192667 421 ntBASIC10.8□□□□□ -0.68
Efnb3O35393 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Efnb3O35393 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.8□□□□□ -0.68
Efnb3O35393 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Efnb3O35393 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.79□□□□□ -0.68
Efnb3O35393 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Efnb3O35393 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Efnb3O35393 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Efnb3O35393 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Efnb3O35393 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.79□□□□□ -0.68
Efnb3O35393 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.79□□□□□ -0.68
Efnb3O35393 Gm6973-201ENSMUST00000117080 721 ntBASIC10.79□□□□□ -0.68
Efnb3O35393 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.79□□□□□ -0.68
Efnb3O35393 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.79□□□□□ -0.68
Efnb3O35393 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.79□□□□□ -0.68
Efnb3O35393 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.79□□□□□ -0.68
Efnb3O35393 Gm37935-201ENSMUST00000192012 982 ntBASIC10.79□□□□□ -0.68
Efnb3O35393 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.79□□□□□ -0.68
Efnb3O35393 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.79□□□□□ -0.68
Efnb3O35393 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Efnb3O35393 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Efnb3O35393 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Efnb3O35393 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Efnb3O35393 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Efnb3O35393 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Efnb3O35393 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Efnb3O35393 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Efnb3O35393 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Efnb3O35393 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Efnb3O35393 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Efnb3O35393 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Efnb3O35393 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Efnb3O35393 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Efnb3O35393 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Efnb3O35393 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Efnb3O35393 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Efnb3O35393 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Efnb3O35393 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms