Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.86□□□□□ -0.35
Cx3cl1O35188 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Gm2445-201ENSMUST00000182798 989 ntBASIC12.86□□□□□ -0.35
Cx3cl1O35188 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cx3cl1O35188 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.85□□□□□ -0.35
Cx3cl1O35188 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cx3cl1O35188 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms