Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10553J3QPF1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Gm10553J3QPF1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10553J3QPF1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10553J3QPF1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10553J3QPF1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10553J3QPF1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
Gm10553J3QPF1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10553J3QPF1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10553J3QPF1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10553J3QPF1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10553J3QPF1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm10553J3QPF1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Gm23984-201ENSMUST00000157139 203 ntBASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.45□□□□□ -0.74
Gm10553J3QPF1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm10553J3QPF1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Gm5354-201ENSMUST00000182417 973 ntBASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Gm43094-201ENSMUST00000196549 921 ntBASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Gm18624-201ENSMUST00000220966 658 ntBASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Gm19220-201ENSMUST00000222682 803 ntBASIC10.44□□□□□ -0.74
Gm10553J3QPF1 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm10553J3QPF1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms