Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim55G3X8Y1 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim55G3X8Y1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Gm14042-201ENSMUST00000120139 833 ntBASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Gm9726-201ENSMUST00000180321 678 ntBASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim55G3X8Y1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Mzt1-203ENSMUST00000227948 952 ntBASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.01□□□□□ -0.17
Trim55G3X8Y1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Gm37472-201ENSMUST00000192342 4052 ntBASIC14□□□□□ -0.17
Trim55G3X8Y1 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim55G3X8Y1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Gm44454-201ENSMUST00000198541 138 ntBASIC14□□□□□ -0.17
Trim55G3X8Y1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14□□□□□ -0.17
Trim55G3X8Y1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14□□□□□ -0.17
Trim55G3X8Y1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Trim55G3X8Y1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim55G3X8Y1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms