Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc188F6WEU2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Gm13875-201ENSMUST00000120162 282 ntBASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Gm15432-201ENSMUST00000121106 195 ntBASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Gm17040-202ENSMUST00000170597 889 ntBASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc188F6WEU2 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Gm6458-201ENSMUST00000211573 635 ntBASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc188F6WEU2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms