Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm18201-201ENSMUST00000174735 875 ntBASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Gm29741-201ENSMUST00000192667 421 ntBASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 AC134537.1-201ENSMUST00000219205 265 ntBASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a3E9PWQ3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Gm7211-201ENSMUST00000172692 1118 ntBASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Gm9132-201ENSMUST00000210182 832 ntBASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a3E9PWQ3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Mir1956-201ENSMUST00000157748 65 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm29615-201ENSMUST00000185371 697 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm28224-201ENSMUST00000186078 697 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm29001-201ENSMUST00000186177 697 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm28292-201ENSMUST00000186593 697 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm28101-201ENSMUST00000187608 697 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm29076-201ENSMUST00000187689 697 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm28302-201ENSMUST00000187931 697 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm28646-201ENSMUST00000188220 697 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm28205-201ENSMUST00000189177 697 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm29032-201ENSMUST00000189797 697 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm28695-201ENSMUST00000190300 697 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm37448-201ENSMUST00000192795 697 ntBASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a3E9PWQ3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a3E9PWQ3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a3E9PWQ3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a3E9PWQ3 Gm45398-201ENSMUST00000210561 165 ntBASIC13.27□□□□□ -0.28
Col6a3E9PWQ3 Ginm1-202ENSMUST00000065124 300 ntBASIC13.27□□□□□ -0.28
Col6a3E9PWQ3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a3E9PWQ3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a3E9PWQ3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.27□□□□□ -0.28
Col6a3E9PWQ3 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a3E9PWQ3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a3E9PWQ3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a3E9PWQ3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a3E9PWQ3 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.27□□□□□ -0.29
Col6a3E9PWQ3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a3E9PWQ3 Gm23949-201ENSMUST00000104027 127 ntBASIC13.27□□□□□ -0.29
Col6a3E9PWQ3 Gm9166-201ENSMUST00000120293 561 ntBASIC13.27□□□□□ -0.29
Col6a3E9PWQ3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms