Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.24□□□□□ -0.45
Shank1D3YZU1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.24□□□□□ -0.45
Shank1D3YZU1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.24□□□□□ -0.45
Shank1D3YZU1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.23□□□□□ -0.45
Shank1D3YZU1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.23□□□□□ -0.45
Shank1D3YZU1 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.23□□□□□ -0.45
Shank1D3YZU1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.23□□□□□ -0.45
Shank1D3YZU1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.23□□□□□ -0.45
Shank1D3YZU1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm29396-201ENSMUST00000185659 716 ntBASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shank1D3YZU1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Gm37008-201ENSMUST00000195712 319 ntBASIC12.22□□□□□ -0.45
Shank1D3YZU1 Gm18935-201ENSMUST00000212692 664 ntBASIC12.22□□□□□ -0.45
Shank1D3YZU1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.22□□□□□ -0.45
Shank1D3YZU1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.22□□□□□ -0.45
Shank1D3YZU1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms