Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm11127A7VMS2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Gm15467-201ENSMUST00000120582 445 ntBASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Gm44771-201ENSMUST00000206975 626 ntBASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm11127A7VMS2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Gm11779-201ENSMUST00000118541 368 ntBASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Gm14494-201ENSMUST00000118786 435 ntBASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Gm11025-201ENSMUST00000140773 466 ntBASIC12.11□□□□□ -0.47
Gm11127A7VMS2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Gm20553-201ENSMUST00000204205 844 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms