Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm12899-201ENSMUST00000120565 551 ntBASIC10.94□□□□□ -0.66
Chd6A3KFM7 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC10.94□□□□□ -0.66
Chd6A3KFM7 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm9463-201ENSMUST00000206707 601 ntBASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.94□□□□□ -0.66
Chd6A3KFM7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.94□□□□□ -0.66
Chd6A3KFM7 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.94□□□□□ -0.66
Chd6A3KFM7 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.94□□□□□ -0.66
Chd6A3KFM7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm12882-201ENSMUST00000121696 517 ntBASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm37666-201ENSMUST00000194110 866 ntBASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.94□□□□□ -0.66
Chd6A3KFM7 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.94□□□□□ -0.66
Chd6A3KFM7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chd6A3KFM7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.93□□□□□ -0.66
Chd6A3KFM7 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms