Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm3854A0A1B0GSS6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm13369-201ENSMUST00000119442 987 ntBASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm4271-201ENSMUST00000174444 973 ntBASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.63□□□□□ -0.23
Gm3854A0A1B0GSS6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm12403-201ENSMUST00000121384 959 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm27682-201ENSMUST00000183930 110 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm37008-201ENSMUST00000195712 319 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm3854A0A1B0GSS6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms