Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm16026-204ENSMUST00000162652 683 ntBASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm2451-201ENSMUST00000199447 999 ntBASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm10290-201ENSMUST00000200451 999 ntBASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm11873-201ENSMUST00000117877 1304 ntBASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm24589-201ENSMUST00000116692 94 ntBASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm7153-201ENSMUST00000117092 455 ntBASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm7977-201ENSMUST00000193787 748 ntBASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm9252-201ENSMUST00000172364 1602 ntBASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms