Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.22□□□□□ -0.61
Trav18A0A075B656 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.22□□□□□ -0.61
Trav18A0A075B656 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav18A0A075B656 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav18A0A075B656 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.21□□□□□ -0.61
Trav18A0A075B656 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.21□□□□□ -0.61
Trav18A0A075B656 Gm5779-201ENSMUST00000218467 910 ntBASIC11.21□□□□□ -0.61
Trav18A0A075B656 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav18A0A075B656 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav18A0A075B656 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav18A0A075B656 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav18A0A075B656 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Mir1897-201ENSMUST00000122581 272 ntBASIC11.2□□□□□ -0.62
Trav18A0A075B656 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Gm33320-201ENSMUST00000192232 530 ntBASIC11.2□□□□□ -0.62
Trav18A0A075B656 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms