Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm18766-201ENSMUST00000189811 808 ntBASIC12.34□□□□□ -0.43
H2afb3S4R1G7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Gm44335-201ENSMUST00000196879 141 ntBASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Gm44297-201ENSMUST00000198304 141 ntBASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Gm44346-201ENSMUST00000198851 141 ntBASIC12.34□□□□□ -0.43
H2afb3S4R1G7 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb3S4R1G7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
H2afb3S4R1G7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Gm27397-201ENSMUST00000184997 107 ntBASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb3S4R1G7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm22065-201ENSMUST00000103753 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm22066-201ENSMUST00000103761 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm24932-201ENSMUST00000103763 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm24115-201ENSMUST00000103799 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm22190-201ENSMUST00000103827 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm22191-201ENSMUST00000103831 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm24721-201ENSMUST00000103849 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm28018-201ENSMUST00000103869 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm26399-201ENSMUST00000103937 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms