Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac6Q9Z2V5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac6Q9Z2V5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac6Q9Z2V5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Mospd4-201ENSMUST00000180618 576 ntBASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Gm3890-201ENSMUST00000182416 207 ntBASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Gm44985-201ENSMUST00000206202 1016 ntBASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Gm44207-201ENSMUST00000204568 1424 ntBASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac6Q9Z2V5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Gm11637-201ENSMUST00000120601 592 ntBASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Gm21769-201ENSMUST00000211922 111 ntBASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Gm6082-201ENSMUST00000215204 454 ntBASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Mir433-201ENSMUST00000093564 124 ntBASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac6Q9Z2V5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Gm37437-201ENSMUST00000194451 1937 ntBASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac6Q9Z2V5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Hdac6Q9Z2V5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.02■□□□□ 0.31
Hdac6Q9Z2V5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hdac6Q9Z2V5 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hdac6Q9Z2V5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hdac6Q9Z2V5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hdac6Q9Z2V5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Hdac6Q9Z2V5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hdac6Q9Z2V5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Gm12363-201ENSMUST00000122250 668 ntBASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac6Q9Z2V5 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms