Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcb1Q9Z0H3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Gm11425-201ENSMUST00000119608 498 ntBASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Mir1982-201ENSMUST00000157368 74 ntBASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Gm9396-201ENSMUST00000076703 567 ntBASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarcb1Q9Z0H3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Gm43438-201ENSMUST00000198133 379 ntBASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Gm6091-201ENSMUST00000098307 165 ntBASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarcb1Q9Z0H3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms