Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.25□□□□□ -0.45
Trem1Q9JKE2 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trem1Q9JKE2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.24□□□□□ -0.45
Trem1Q9JKE2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Gm27704-201ENSMUST00000185094 107 ntBASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.24□□□□□ -0.45
Trem1Q9JKE2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trem1Q9JKE2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Gm15372-201ENSMUST00000120729 834 ntBASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms