Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Gm11860-201ENSMUST00000122346 1010 ntBASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Gm20760-201ENSMUST00000179197 648 ntBASIC10.94□□□□□ -0.66
Smco4Q9JIS3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Mir770-201ENSMUST00000103252 94 ntBASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Gm45058-201ENSMUST00000205810 766 ntBASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Gm18959-201ENSMUST00000208954 655 ntBASIC10.93□□□□□ -0.66
Smco4Q9JIS3 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.93□□□□□ -0.66
Smco4Q9JIS3 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.93□□□□□ -0.66
Smco4Q9JIS3 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Smco4Q9JIS3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smco4Q9JIS3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco4Q9JIS3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.92□□□□□ -0.66
Smco4Q9JIS3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco4Q9JIS3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco4Q9JIS3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms