Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm8652-201ENSMUST00000181363 964 ntBASIC16.23■□□□□ 0.19
Ube3bQ9ES34 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ube3bQ9ES34 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube3bQ9ES34 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube3bQ9ES34 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube3bQ9ES34 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.23■□□□□ 0.19
Ube3bQ9ES34 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube3bQ9ES34 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube3bQ9ES34 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube3bQ9ES34 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube3bQ9ES34 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube3bQ9ES34 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube3bQ9ES34 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Gm6152-201ENSMUST00000151704 340 ntBASIC16.22■□□□□ 0.19
Ube3bQ9ES34 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Gm38671-201ENSMUST00000200573 130 ntBASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Itm2b-204ENSMUST00000228637 783 ntBASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube3bQ9ES34 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Gm27486-201ENSMUST00000184923 80 ntBASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube3bQ9ES34 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ube3bQ9ES34 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ube3bQ9ES34 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms