Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne8Q9DC53 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cpne8Q9DC53 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Gm14767-201ENSMUST00000121559 586 ntBASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne8Q9DC53 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Gm15240-201ENSMUST00000118156 720 ntBASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Gm13453-201ENSMUST00000118708 357 ntBASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Gm3436-201ENSMUST00000179930 840 ntBASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.26□□□□□ -0.13
Cpne8Q9DC53 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpne8Q9DC53 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne8Q9DC53 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne8Q9DC53 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne8Q9DC53 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne8Q9DC53 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.25□□□□□ -0.13
Cpne8Q9DC53 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne8Q9DC53 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne8Q9DC53 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne8Q9DC53 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne8Q9DC53 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cpne8Q9DC53 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms