Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Proscos-202ENSMUST00000178990 666 ntBASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Gm40466-201ENSMUST00000212174 422 ntBASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Itm2b-204ENSMUST00000228637 783 ntBASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Stag1Q9D3E6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Stag1Q9D3E6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Stag1Q9D3E6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Stag1Q9D3E6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Stag1Q9D3E6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Stag1Q9D3E6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Stag1Q9D3E6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.27■□□□□ 0.19
Stag1Q9D3E6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Gm12384-201ENSMUST00000119228 919 ntBASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Gm8810-201ENSMUST00000172895 754 ntBASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Gm38144-201ENSMUST00000192790 465 ntBASIC16.26■□□□□ 0.19
Stag1Q9D3E6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Stag1Q9D3E6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Gm10156-201ENSMUST00000122364 462 ntBASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Gm17420-201ENSMUST00000164753 153 ntBASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Gm29608-201ENSMUST00000190444 463 ntBASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Gm43818-201ENSMUST00000200605 466 ntBASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Gm10478-201ENSMUST00000084451 396 ntBASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms