Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Gm45293-201ENSMUST00000209754 1812 ntBASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Gm16198-201ENSMUST00000118766 670 ntBASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Gm11543-201ENSMUST00000120758 370 ntBASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Gm44335-201ENSMUST00000196879 141 ntBASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Gm44297-201ENSMUST00000198304 141 ntBASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Gm44346-201ENSMUST00000198851 141 ntBASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 AC154621.1-201ENSMUST00000226155 1119 ntBASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Gm13332-201ENSMUST00000120451 1398 ntBASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Mrpl55Q9CZ83 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Gm13365-201ENSMUST00000121188 973 ntBASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Gm18737-201ENSMUST00000173594 937 ntBASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Gm18889-201ENSMUST00000174284 929 ntBASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Gm5628-201ENSMUST00000222318 1049 ntBASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Mrpl55Q9CZ83 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms