Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.11□□□□□ -0.15
Snf8Q9CZ28 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Snf8Q9CZ28 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Gm25911-201ENSMUST00000157621 56 ntBASIC14.1□□□□□ -0.15
Snf8Q9CZ28 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.1□□□□□ -0.15
Snf8Q9CZ28 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snf8Q9CZ28 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Gm11594-201ENSMUST00000122313 162 ntBASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.09□□□□□ -0.15
Snf8Q9CZ28 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Mir497b-201ENSMUST00000093601 125 ntBASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snf8Q9CZ28 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Snf8Q9CZ28 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Mir698-201ENSMUST00000102164 109 ntBASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Gm4995-201ENSMUST00000117247 432 ntBASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms