Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Hdhd3Q9CYW4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Gm21362-201ENSMUST00000194272 928 ntBASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hdhd3Q9CYW4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hdhd3Q9CYW4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms