Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Otud1Q9CUB6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Gm27772-201ENSMUST00000184900 187 ntBASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Gm28911-201ENSMUST00000188837 117 ntBASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Otud1Q9CUB6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Otud1Q9CUB6 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.96□□□□□ -0.34
Otud1Q9CUB6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Gm27701-201ENSMUST00000184498 110 ntBASIC12.95□□□□□ -0.34
Otud1Q9CUB6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.95□□□□□ -0.34
Otud1Q9CUB6 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.95□□□□□ -0.34
Otud1Q9CUB6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Otud1Q9CUB6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Otud1Q9CUB6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms