Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retreg3Q9CQV4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retreg3Q9CQV4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retreg3Q9CQV4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.94□□□□□ -0.18
Retreg3Q9CQV4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Gm4732-201ENSMUST00000118778 473 ntBASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Gm8927-201ENSMUST00000181978 981 ntBASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Gm37857-201ENSMUST00000191784 1199 ntBASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Gm43906-201ENSMUST00000203194 906 ntBASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Gm45276-201ENSMUST00000209549 1086 ntBASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Gm3222-201ENSMUST00000071282 990 ntBASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retreg3Q9CQV4 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Gm24541-201ENSMUST00000103871 96 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Gm15321-201ENSMUST00000121290 288 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Gm16112-201ENSMUST00000159075 382 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Gm44855-201ENSMUST00000205725 362 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Gm7653-201ENSMUST00000214567 508 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retreg3Q9CQV4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retreg3Q9CQV4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Retreg3Q9CQV4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retreg3Q9CQV4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retreg3Q9CQV4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retreg3Q9CQV4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retreg3Q9CQV4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Retreg3Q9CQV4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retreg3Q9CQV4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retreg3Q9CQV4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms