Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prpf8Q99PV0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.22□□□□□ -0.61
Prpf8Q99PV0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Gm8652-201ENSMUST00000181363 964 ntBASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prpf8Q99PV0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.21□□□□□ -0.61
Prpf8Q99PV0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prpf8Q99PV0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Gm43179-201ENSMUST00000198797 275 ntBASIC11.21□□□□□ -0.62
Prpf8Q99PV0 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.21□□□□□ -0.62
Prpf8Q99PV0 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Prpf8Q99PV0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prpf8Q99PV0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Prpf8Q99PV0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Prpf8Q99PV0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms