Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Gm13015-201ENSMUST00000118674 204 ntBASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Gm6222-201ENSMUST00000120787 396 ntBASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.43□□□□□ -0.26
Trim8Q99PJ2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.42□□□□□ -0.26
Trim8Q99PJ2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim8Q99PJ2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms