Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Mir6990-201ENSMUST00000183724 91 ntBASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Gm37714-201ENSMUST00000194742 342 ntBASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.91□□□□□ -0.34
Nkd1Q99MH6 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkd1Q99MH6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Gm25287-201ENSMUST00000103846 110 ntBASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Gm22918-201ENSMUST00000103855 110 ntBASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Gm9719-201ENSMUST00000162765 543 ntBASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Nkd1Q99MH6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Nkd1Q99MH6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Nkd1Q99MH6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.9□□□□□ -0.35
Nkd1Q99MH6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Nkd1Q99MH6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Gm18766-201ENSMUST00000189811 808 ntBASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Gm44335-201ENSMUST00000196879 141 ntBASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Gm44297-201ENSMUST00000198304 141 ntBASIC12.89□□□□□ -0.35
Nkd1Q99MH6 Gm44346-201ENSMUST00000198851 141 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms