Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdha9Q91Y11 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha9Q91Y11 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Gm15376-201ENSMUST00000122258 783 ntBASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Gm37917-201ENSMUST00000194711 392 ntBASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha9Q91Y11 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdha9Q91Y11 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha9Q91Y11 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Pcdha9Q91Y11 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha9Q91Y11 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha9Q91Y11 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha9Q91Y11 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha9Q91Y11 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms